cr_overlap

Find (and count) overlaps

extern (C) @nogc nothrow

int64_t

cr_overlap

(

const(cgranges_t)* cr

,

const(char)* ctg

,

int32_t st

,

int32_t en

,

int64_t** b_

,

int64_t* m_b_

)

Parameters

cr const(cgranges_t)*: cgranges struct
ctg const(char)*: contig \0 term Cstring
st int32_t: start coord
en int32_t: end coord
m_b_ int64_t*: max b

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intervaltree cgranges functions

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structs